Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN04487832_101161 | Not Available | + | 202755 - 203654 | 34826.2 |
| predicted component of the ribosome quality control (rqc) complex, yloa/tae2 family, contains fibronectin-binding (fbpa) and duf814 domains | SAMN04487832_101162 | Not Available | + | 203667 - 205421 | 65870.1 |
| dna-3-methyladenine glycosylase | SAMN04487832_101163 | Not Available | + | 205421 - 205939 | 19539.4 |
| arac family transcriptional regulator, arabinose operon regulatory protein | SAMN04487832_101164 | Not Available | + | 205936 - 206712 | 29591.3 |
| hypothetical protein | SAMN04487832_101165 | Not Available | + | 206772 - 208274 | 58205.9 |
| hypothetical protein | SAMN04487832_101166 | Not Available | - | 208368 - 208625 | 9861.42 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04487832_101167 | Not Available | - | 208618 - 209280 | 24830.8 |
| starch synthase | SAMN04487832_101168 | Not Available | - | 209381 - 210835 | 56053.8 |
| exodeoxyribonuclease-3 | SAMN04487832_101169 | Not Available | - | 211024 - 211770 | 28753.8 |
| phage shock protein a (pspa) family protein | SAMN04487832_101170 | Not Available | + | 212178 - 212897 | 26466.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.