Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN04487832_1209 | Not Available | + | 3279727 - 3281133 | 53049.7 |
| udp-glucose 4-epimerase | SAMN04487832_12010 | Not Available | + | 3281233 - 3282186 | 35784.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487832_12011 | Not Available | + | 3282246 - 3283250 | 38541.3 |
| ribosomal 50s subunit-recycling heat shock protein, contains s4 domain | SAMN04487832_12012 | Not Available | - | 3283394 - 3283636 | 9020.04 |
| dna-binding protein hu-beta | SAMN04487832_12013 | Not Available | - | 3283694 - 3283969 | 9681.86 |
| tetrapyrrole methylase family protein / mazg family protein | SAMN04487832_12014 | Not Available | - | 3283956 - 3284783 | 31405.2 |
| tryptophanyl-trna synthetase | SAMN04487832_12015 | Not Available | - | 3284944 - 3285942 | 37301.6 |
| hypothetical protein | SAMN04487832_12016 | Not Available | - | 3285953 - 3286468 | 19241.3 |
| 2-aminoadipate transaminase | SAMN04487832_12017 | Not Available | - | 3286723 - 3287916 | 44720.4 |
| dockerin type i repeat-containing protein | SAMN04487832_12018 | Not Available | + | 3288744 - 3289853 | 39202.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.