Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphopantetheine attachment site | SAMN04487832_11961 | Not Available | + | 3268347 - 3268592 | 9525.17 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN04487832_11962 | Not Available | + | 3268599 - 3269801 | 43611.9 |
| hypothetical protein | SAMN04487832_1201 | Not Available | + | 3270628 - 3271407 | 27779.9 |
| hypothetical protein | SAMN04487832_1202 | Not Available | + | 3271813 - 3274305 | 89740.1 |
| hypothetical protein | SAMN04487832_1203 | Not Available | + | 3274396 - 3275487 | 37016.2 |
| trna(ile)-lysidine synthase tils/mesj | SAMN04487832_1204 | Not Available | - | 3275574 - 3276323 | 28198.0 |
| protein of unknown function | SAMN04487832_1205 | Not Available | + | 3276527 - 3277057 | 19978.4 |
| uracil-dna glycosylase | SAMN04487832_1206 | Not Available | + | 3277133 - 3277804 | 25526.5 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN04487832_1207 | Not Available | + | 3277820 - 3278689 | 32048.4 |
| vitamin b12 dependent methionine synthase, activation domain | SAMN04487832_1208 | Not Available | + | 3278676 - 3279347 | 24432.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.