Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | SAMN04487832_11941 | Not Available | + | 3245837 - 3247360 | 55227.4 |
| hypothetical protein | SAMN04487832_11942 | Not Available | + | 3247814 - 3250246 | 90024.8 |
| swim zinc finger | SAMN04487832_11943 | Not Available | - | 3250448 - 3252085 | 64259.7 |
| hypothetical protein | SAMN04487832_11944 | Not Available | - | 3252102 - 3252662 | 21529.4 |
| helix-turn-helix domain-containing protein | SAMN04487832_11945 | Not Available | + | 3252919 - 3253542 | 24294.7 |
| integrase core domain-containing protein | SAMN04487832_11946 | Not Available | + | 3253539 - 3254009 | 18452.5 |
| uncharacterized protein | SAMN04487832_11947 | Not Available | - | 3254185 - 3255234 | 40437.0 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN04487832_11948 | Not Available | - | 3255225 - 3256496 | 48634.1 |
| hypothetical protein | SAMN04487832_11949 | Not Available | - | 3256498 - 3257529 | 39387.6 |
| hypothetical protein | SAMN04487832_11950 | Not Available | - | 3257672 - 3257857 | 6982.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.