Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11931 | Not Available | + | 3234785 - 3235462 | 24894.6 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04487832_11932 | Not Available | + | 3235462 - 3236775 | 48364.0 |
| 23s rrna (adenine2503-c2)-methyltransferase | SAMN04487832_11933 | Not Available | + | 3236788 - 3237849 | 39757.1 |
| protein phosphatase | SAMN04487832_11934 | Not Available | + | 3237846 - 3238571 | 26655.3 |
| serine/threonine protein kinase | SAMN04487832_11935 | Not Available | + | 3238590 - 3240989 | 88755.1 |
| ribosome biogenesis gtpase | SAMN04487832_11936 | Not Available | + | 3240986 - 3241864 | 32369.6 |
| thiamine pyrophosphokinase | SAMN04487832_11937 | Not Available | + | 3241861 - 3242490 | 23222.0 |
| vanz like family protein | SAMN04487832_11938 | Not Available | - | 3242675 - 3243157 | 17714.9 |
| hypothetical protein | SAMN04487832_11939 | Not Available | + | 3243428 - 3244660 | 46057.1 |
| hypothetical protein | SAMN04487832_11940 | Not Available | + | 3244763 - 3245662 | 33289.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.