Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, laci/purr family | SAMN04487832_11911 | Not Available | + | 3211009 - 3213252 | 85877.0 |
| hypothetical protein | SAMN04487832_11912 | Not Available | + | 3213252 - 3213440 | 6907.79 |
| uncharacterized conserved protein, duf697 family | SAMN04487832_11913 | Not Available | + | 3213445 - 3214587 | 41223.2 |
| serine protease do | SAMN04487832_11914 | Not Available | - | 3214810 - 3216120 | 46144.8 |
| metallo-beta-lactamase family protein | SAMN04487832_11915 | Not Available | + | 3216483 - 3218078 | 58747.6 |
| hypothetical protein | SAMN04487832_11916 | Not Available | + | 3218102 - 3218389 | 11136.0 |
| hypothetical protein | SAMN04487832_11917 | Not Available | + | 3218386 - 3218703 | 11533.7 |
| atp-binding cassette, subfamily f, member 3 | SAMN04487832_11918 | Not Available | - | 3218760 - 3220685 | 73299.3 |
| protein of unknown function | SAMN04487832_11919 | Not Available | - | 3220867 - 3222261 | 51507.9 |
| abc-type uncharacterized transport system | SAMN04487832_11920 | Not Available | - | 3222261 - 3223784 | 56583.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.