Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_1191 | Not Available | - | 3197188 - 3197475 | 11299.9 |
| pyruvate-ferredoxin/flavodoxin oxidoreductase | SAMN04487832_1192 | Not Available | - | 3197700 - 3201233 | 127958.0 |
| gdsl-like lipase/acylhydrolase family protein | SAMN04487832_1193 | Not Available | + | 3201897 - 3203342 | 52118.5 |
| uncharacterized protein, upf0371 family | SAMN04487832_1194 | Not Available | - | 3203393 - 3204874 | 55234.2 |
| mrna interferase mazf | SAMN04487832_1195 | Not Available | + | 3205208 - 3205558 | 12504.1 |
| hypothetical protein | SAMN04487832_1196 | Not Available | + | 3206068 - 3206211 | 5533.95 |
| glycyl-trna synthetase | SAMN04487832_1197 | Not Available | + | 3206307 - 3207713 | 54178.4 |
| catechol 2,3-dioxygenase | SAMN04487832_1198 | Not Available | + | 3207990 - 3208391 | 15416.3 |
| hypothetical protein | SAMN04487832_1199 | Not Available | - | 3208780 - 3209613 | 30504.4 |
| hypothetical protein | SAMN04487832_11910 | Not Available | - | 3209633 - 3210370 | 26971.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.