Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dockerin type i repeat-containing protein | SAMN04487832_11862 | Not Available | - | 3188878 - 3189588 | 25388.7 |
| hypothetical protein | SAMN04487832_11863 | Not Available | - | 3189931 - 3190644 | 25655.8 |
| rubrerythrin | SAMN04487832_11864 | Not Available | - | 3190912 - 3191505 | 23056.2 |
| uncharacterized protein tigr03905 | SAMN04487832_11865 | Not Available | + | 3191673 - 3191930 | 9351.18 |
| dna-binding transcriptional regulator, marr family | SAMN04487832_11866 | Not Available | + | 3191944 - 3192387 | 16867.8 |
| lipid kinase, yegs/rv2252/bmru family | SAMN04487832_11867 | Not Available | - | 3192444 - 3193394 | 35205.1 |
| Trna-gln | Not Available | Not Available | + | 3193621 - 3193696 | Not Available |
| site-specific dna recombinase | SAMN04487832_11869 | Not Available | - | 3194455 - 3195954 | 57460.9 |
| hypothetical protein | SAMN04487832_11870 | Not Available | + | 3196375 - 3196824 | 16702.4 |
| resolvase, n terminal domain | SAMN04487832_11871 | Not Available | - | 3196849 - 3197148 | 11677.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.