Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent protease (includes spoivfb) | SAMN04487832_11822 | Not Available | + | 3155306 - 3155995 | 25409.8 |
| condensin subunit scpa | SAMN04487832_11823 | Not Available | + | 3155999 - 3156751 | 28691.2 |
| segregation and condensation protein b | SAMN04487832_11824 | Not Available | + | 3156721 - 3157368 | 23235.2 |
| hypothetical protein | SAMN04487832_11825 | Not Available | + | 3157387 - 3158241 | 32224.9 |
| sporulation protein ytfj | SAMN04487832_11826 | Not Available | + | 3158252 - 3158686 | 14875.7 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN04487832_11827 | Not Available | + | 3158750 - 3159877 | 40210.9 |
| 23s rrna pseudouridine2605 synthase | SAMN04487832_11828 | Not Available | + | 3159926 - 3160633 | 26697.9 |
| hypothetical protein | SAMN04487832_11829 | Not Available | + | 3160635 - 3161003 | 13837.4 |
| homoserine o-succinyltransferase | SAMN04487832_11830 | Not Available | + | 3161033 - 3161980 | 37109.0 |
| hypothetical protein | SAMN04487832_11831 | Not Available | + | 3162000 - 3162236 | 8336.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.