Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN04487832_11812 | Not Available | + | 3143678 - 3146065 | 89716.9 |
| stage v sporulation protein g | SAMN04487832_11813 | Not Available | - | 3146173 - 3146559 | 14331.1 |
| uncharacterized membrane protein yfho | SAMN04487832_11814 | Not Available | + | 3146854 - 3149403 | 97164.2 |
| adp-ribose pyrophosphatase | SAMN04487832_11815 | Not Available | + | 3149393 - 3149932 | 20310.3 |
| hypothetical protein | SAMN04487832_11816 | Not Available | + | 3149997 - 3150368 | 13864.5 |
| uncharacterized protein yvpb | SAMN04487832_11817 | Not Available | - | 3150444 - 3151493 | 38980.1 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487832_11818 | Not Available | + | 3151684 - 3152349 | 25203.7 |
| signal transduction histidine kinase | SAMN04487832_11819 | Not Available | + | 3152346 - 3153797 | 53443.5 |
| hypothetical protein | SAMN04487832_11820 | Not Available | + | 3153787 - 3154800 | 38089.3 |
| large subunit ribosomal protein l28 | SAMN04487832_11821 | Not Available | - | 3154864 - 3155049 | 6841.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.