Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choice-of-anchor a domain-containing protein | SAMN04487832_1182 | Not Available | - | 3124590 - 3133063 | 303526.0 |
| rna polymerase primary sigma factor/dna-binding protein hu-beta | SAMN04487832_1183 | Not Available | - | 3133462 - 3133842 | 13278.9 |
| dna-binding protein hu-beta | SAMN04487832_1184 | Not Available | - | 3133863 - 3134138 | 9681.76 |
| putative hydrolases of hd superfamily | SAMN04487832_1185 | Not Available | - | 3134426 - 3134995 | 21810.8 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN04487832_1186 | Not Available | - | 3135163 - 3137760 | 96635.1 |
| hypothetical protein | SAMN04487832_1187 | Not Available | - | 3137812 - 3138456 | 24813.8 |
| protein of unknown function | SAMN04487832_1188 | Not Available | - | 3139154 - 3140650 | 49838.1 |
| protein of unknown function | SAMN04487832_1189 | Not Available | - | 3140759 - 3141511 | 27846.1 |
| vtc domain-containing protein | SAMN04487832_11810 | Not Available | - | 3141513 - 3142313 | 31450.6 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SAMN04487832_11811 | Not Available | - | 3142667 - 3143191 | 18667.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.