Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11766 | Not Available | - | 3099796 - 3099948 | 5613.66 |
| bacteriocin-type signal sequence-containing protein | SAMN04487832_11767 | Not Available | - | 3100005 - 3100139 | 5081.41 |
| hypothetical protein | SAMN04487832_11768 | Not Available | - | 3100212 - 3100391 | 6535.88 |
| hypothetical protein | SAMN04487832_11769 | Not Available | - | 3100714 - 3100941 | 8156.36 |
| effector-binding domain-containing protein | SAMN04487832_11770 | Not Available | - | 3100945 - 3101418 | 17237.8 |
| ghkl domain-containing protein | SAMN04487832_11771 | Not Available | - | 3102134 - 3103408 | 47230.8 |
| two component transcriptional regulator, lyttr family | SAMN04487832_11772 | Not Available | - | 3103419 - 3104120 | 27272.1 |
| uncharacterized conserved protein ylou, alkaline shock protein (asp23) family | SAMN04487832_11773 | Not Available | + | 3104641 - 3104997 | 12993.6 |
| hypothetical protein | SAMN04487832_11774 | Not Available | + | 3105018 - 3106673 | 59510.4 |
| atpase/gtpase, aaa15 family | SAMN04487832_11775 | Not Available | + | 3106818 - 3108986 | 81938.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.