Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ycap, duf421 family | SAMN04487832_11716 | Not Available | + | 3068451 - 3069146 | 25597.8 |
| protein of unknown function | SAMN04487832_11717 | Not Available | + | 3069148 - 3069519 | 13959.0 |
| hypothetical protein | SAMN04487832_11718 | Not Available | - | 3069550 - 3070521 | 35081.6 |
| nitroreductase | SAMN04487832_11719 | Not Available | - | 3070630 - 3071163 | 19712.7 |
| large subunit ribosomal protein l17 | SAMN04487832_11720 | Not Available | - | 3071407 - 3071748 | 12629.5 |
| dna-directed rna polymerase subunit alpha | SAMN04487832_11721 | Not Available | - | 3071809 - 3072774 | 35423.6 |
| small subunit ribosomal protein s4 | SAMN04487832_11722 | Not Available | - | 3072841 - 3073440 | 22851.9 |
| small subunit ribosomal protein s11 | SAMN04487832_11723 | Not Available | - | 3073462 - 3073866 | 14510.6 |
| ssu ribosomal protein s13p | SAMN04487832_11724 | Not Available | - | 3073881 - 3074249 | 13757.8 |
| translation initiation factor if-1 | SAMN04487832_11725 | Not Available | - | 3074448 - 3074666 | 8184.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.