Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative tim-barrel protein, nifr3 family | SAMN04487832_1176 | Not Available | - | 3056324 - 3057322 | 35901.2 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN04487832_1177 | Not Available | - | 3057322 - 3057810 | 18008.5 |
| dna polymerase i | SAMN04487832_1178 | Not Available | + | 3058370 - 3060904 | 93066.6 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04487832_1179 | Not Available | + | 3060909 - 3061367 | 16752.1 |
| n6-l-threonylcarbamoyladenine synthase | SAMN04487832_11710 | Not Available | + | 3061381 - 3062391 | 35361.3 |
| hypothetical protein | SAMN04487832_11711 | Not Available | - | 3062652 - 3063743 | 38617.0 |
| yabp family protein | SAMN04487832_11712 | Not Available | + | 3063804 - 3064088 | 11011.1 |
| putative stage iv sporulation protein yqfd | SAMN04487832_11713 | Not Available | + | 3064066 - 3065223 | 43914.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_11714 | Not Available | + | 3065421 - 3065975 | 21760.8 |
| hypothetical protein | SAMN04487832_11715 | Not Available | + | 3065962 - 3068346 | 88988.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.