Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11659 | Not Available | - | 3037859 - 3040417 | 96903.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_11660 | Not Available | - | 3040410 - 3040970 | 21867.1 |
| arac-type dna-binding protein | SAMN04487832_11661 | Not Available | - | 3041130 - 3041909 | 30380.0 |
| lysophospholipase l1 | SAMN04487832_11662 | Not Available | + | 3042101 - 3045856 | 135946.0 |
| hypothetical protein | SAMN04487832_11663 | Not Available | + | 3045978 - 3046251 | 10700.1 |
| repeat of unknown function | SAMN04487832_1171 | Not Available | - | 3046252 - 3047609 | 45754.2 |
| cohesin domain-containing protein | SAMN04487832_1172 | Not Available | - | 3048322 - 3051122 | 97307.9 |
| hypothetical protein | SAMN04487832_1173 | Not Available | - | 3051180 - 3053405 | 76776.2 |
| cohesin domain-containing protein | SAMN04487832_1174 | Not Available | - | 3053503 - 3054384 | 30088.5 |
| poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) | SAMN04487832_1175 | Not Available | - | 3054814 - 3056088 | 47241.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.