Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate ferredoxin oxidoreductase gamma subunit | SAMN04487832_11649 | Not Available | - | 3027073 - 3027588 | 18231.0 |
| cysteine synthase a | SAMN04487832_11650 | Not Available | - | 3027793 - 3028704 | 32214.4 |
| cystathionine beta-lyase | SAMN04487832_11651 | Not Available | - | 3028716 - 3029876 | 41645.7 |
| methyltransferase, tigr00027 family | SAMN04487832_11652 | Not Available | - | 3029888 - 3030784 | 34533.3 |
| nitt/taut family transport system permease protein | SAMN04487832_11653 | Not Available | - | 3031566 - 3032486 | 33879.4 |
| nitt/taut family transport system atp-binding protein | SAMN04487832_11654 | Not Available | - | 3032483 - 3033301 | 30213.2 |
| nitt/taut family transport system substrate-binding protein | SAMN04487832_11655 | Not Available | - | 3033288 - 3034490 | 43765.2 |
| hypothetical protein | SAMN04487832_11656 | Not Available | + | 3034869 - 3035077 | 7448.03 |
| gdsl-like lipase/acylhydrolase | SAMN04487832_11657 | Not Available | + | 3036071 - 3036514 | 15980.5 |
| endo-1,4-beta-xylanase | SAMN04487832_11658 | Not Available | - | 3036832 - 3037650 | 30432.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.