Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11639 | Not Available | - | 3015009 - 3015251 | 8696.61 |
| hypothetical protein | SAMN04487832_11640 | Not Available | - | 3015374 - 3015613 | 8621.55 |
| type 2 lantibiotic biosynthesis protein lanm | SAMN04487832_11641 | Not Available | - | 3015808 - 3018867 | 114685.0 |
| calcineurin-like phosphoesterase | SAMN04487832_11642 | Not Available | + | 3019251 - 3021257 | 72824.8 |
| s-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (ai-2) synthesis protein luxs | SAMN04487832_11643 | Not Available | - | 3021563 - 3022024 | 17177.4 |
| aminotransferase | SAMN04487832_11644 | Not Available | - | 3022030 - 3023196 | 43884.3 |
| phenylacetate-coa ligase | SAMN04487832_11645 | Not Available | - | 3023281 - 3024621 | 49970.2 |
| pyruvate ferredoxin oxidoreductase beta subunit | SAMN04487832_11646 | Not Available | - | 3024734 - 3025627 | 32310.3 |
| pyruvate ferredoxin oxidoreductase alpha subunit | SAMN04487832_11647 | Not Available | - | 3025617 - 3026786 | 42763.2 |
| pyruvate ferredoxin oxidoreductase delta subunit | SAMN04487832_11648 | Not Available | - | 3026783 - 3027076 | 10890.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.