Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487832_101131 | Not Available | + | 166236 - 167522 | 48763.0 |
| hypothetical protein | SAMN04487832_101132 | Not Available | + | 167473 - 169137 | 62709.0 |
| putative aldouronate transport system substrate-binding protein | SAMN04487832_101133 | Not Available | + | 169137 - 170762 | 62092.2 |
| pyridoxine kinase | SAMN04487832_101134 | Not Available | + | 170904 - 171740 | 30520.4 |
| rna polymerase sporulation-specific sigma factor | SAMN04487832_101135 | Not Available | + | 171821 - 172594 | 29176.2 |
| high affinity sulphate transporter 1 | SAMN04487832_101136 | Not Available | + | 172617 - 174803 | 80132.9 |
| cysteine desulfurase | SAMN04487832_101137 | Not Available | + | 174904 - 176031 | 40176.0 |
| thiamine biosynthesis protein thii | SAMN04487832_101138 | Not Available | + | 176066 - 177244 | 43655.2 |
| sortase b | SAMN04487832_101139 | Not Available | + | 177454 - 178818 | 51858.9 |
| sortase family protein | SAMN04487832_101140 | Not Available | + | 178845 - 179780 | 35526.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.