Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN04487832_1169 | Not Available | + | 2981010 - 2981936 | 34895.0 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN04487832_11610 | Not Available | + | 2981933 - 2982931 | 37651.1 |
| predicted membrane protein | SAMN04487832_11611 | Not Available | + | 2982941 - 2984662 | 64481.6 |
| putative abc transport system permease protein | SAMN04487832_11612 | Not Available | + | 2984801 - 2987173 | 87758.8 |
| putative abc transport system atp-binding protein | SAMN04487832_11613 | Not Available | + | 2987187 - 2987945 | 28355.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487832_11614 | Not Available | + | 2987947 - 2988612 | 24802.9 |
| signal transduction histidine kinase | SAMN04487832_11615 | Not Available | + | 2988614 - 2989846 | 46396.3 |
| acylphosphatase | SAMN04487832_11616 | Not Available | - | 2989920 - 2990189 | 10225.0 |
| hypothetical protein | SAMN04487832_11617 | Not Available | - | 2990190 - 2990774 | 22661.5 |
| outer membrane protein ompa | SAMN04487832_11618 | Not Available | - | 2991005 - 2992627 | 60159.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.