Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN04487832_11550 | Not Available | + | 2944574 - 2945437 | 31553.6 |
| hypothetical protein | SAMN04487832_11551 | Not Available | + | 2945699 - 2946220 | 19382.9 |
| sugar fermentation stimulation protein a | SAMN04487832_11552 | Not Available | + | 2947976 - 2948674 | 26188.3 |
| asparaginyl-trna synthetase | SAMN04487832_11554 | Not Available | + | 2949289 - 2950662 | 51415.3 |
| aspartate-ammonia ligase | SAMN04487832_11555 | Not Available | + | 2950824 - 2951888 | 40167.1 |
| superfamily i dna and/or rna helicase | SAMN04487832_11556 | Not Available | + | 2952250 - 2958048 | 214095.0 |
| udp-n-acetylmuramyl tripeptide synthase | SAMN04487832_11557 | Not Available | + | 2958062 - 2959411 | 50305.2 |
| hypothetical protein | SAMN04487832_11558 | Not Available | + | 2959398 - 2960141 | 27659.1 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN04487832_11559 | Not Available | + | 2960186 - 2961490 | 48686.3 |
| stage v sporulation protein b | SAMN04487832_11560 | Not Available | + | 2961780 - 2963312 | 54026.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.