Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small, acid-soluble spore protein, alpha/beta type | SAMN04487832_11540 | Not Available | - | 2932776 - 2932979 | 7321.63 |
| hypothetical protein | SAMN04487832_11541 | Not Available | - | 2933343 - 2934719 | 50616.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_11542 | Not Available | - | 2934737 - 2935303 | 20973.9 |
| hypothetical protein | SAMN04487832_11543 | Not Available | - | 2935509 - 2936216 | 25880.1 |
| hypothetical protein | SAMN04487832_11544 | Not Available | - | 2936318 - 2938753 | 86212.8 |
| small conductance mechanosensitive channel | SAMN04487832_11545 | Not Available | + | 2939412 - 2940263 | 30866.7 |
| hypothetical protein | SAMN04487832_11546 | Not Available | + | 2940289 - 2941530 | 43703.7 |
| hypothetical protein | SAMN04487832_11547 | Not Available | + | 2941527 - 2943122 | 57935.1 |
| hypothetical protein | SAMN04487832_11548 | Not Available | + | 2943155 - 2944294 | 41507.0 |
| hypothetical protein | SAMN04487832_11549 | Not Available | + | 2944299 - 2944574 | 10635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.