Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multiple sugar transport system permease protein | SAMN04487832_11530 | Not Available | - | 2921147 - 2922004 | 31778.1 |
| multiple sugar transport system permease protein | SAMN04487832_11531 | Not Available | - | 2921995 - 2922975 | 36524.1 |
| extracellular solute-binding protein | SAMN04487832_11532 | Not Available | - | 2923052 - 2923609 | 19887.9 |
| extracellular solute-binding protein | SAMN04487832_11533 | Not Available | - | 2923841 - 2924470 | 21520.6 |
| xylose isomerase | SAMN04487832_11534 | Not Available | - | 2924523 - 2925836 | 48596.5 |
| beta-glucosidase | SAMN04487832_11535 | Not Available | - | 2925850 - 2927928 | 75918.7 |
| hypothetical protein | SAMN04487832_11536 | Not Available | - | 2927942 - 2928838 | 33812.9 |
| arac-type dna-binding protein | SAMN04487832_11537 | Not Available | + | 2929062 - 2929925 | 33456.2 |
| penicillin binding protein transpeptidase domain-containing protein | SAMN04487832_11538 | Not Available | - | 2930069 - 2931559 | 54062.8 |
| formate/nitrite transporter foca, fnt family | SAMN04487832_11539 | Not Available | + | 2931856 - 2932509 | 23387.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.