Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crispr system cascade subunit case | SAMN04487832_11510 | Not Available | - | 2903276 - 2903914 | 24069.0 |
| crispr system cascade subunit casd | SAMN04487832_11511 | Not Available | - | 2903923 - 2904576 | 24564.7 |
| crispr system cascade subunit casc | SAMN04487832_11512 | Not Available | - | 2904579 - 2905664 | 39705.1 |
| crispr system cascade subunit casb | SAMN04487832_11513 | Not Available | - | 2905661 - 2906224 | 21378.4 |
| crispr system cascade subunit casa | SAMN04487832_11514 | Not Available | - | 2906230 - 2907864 | 62660.8 |
| crispr-associated endonuclease/helicase cas3 | SAMN04487832_11515 | Not Available | - | 2907851 - 2910496 | 99923.3 |
| nadph-dependent fmn reductase | SAMN04487832_11516 | Not Available | + | 2910974 - 2911507 | 19586.8 |
| ribosomal protein s18 acetylase rimi | SAMN04487832_11517 | Not Available | + | 2911518 - 2911982 | 17678.4 |
| rhodanese-related sulfurtransferase | SAMN04487832_11518 | Not Available | + | 2911963 - 2912451 | 17729.2 |
| hypothetical protein | SAMN04487832_11519 | Not Available | + | 2912474 - 2913013 | 20926.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.