Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily b | SAMN04487832_11477 | Not Available | - | 2878022 - 2879884 | 69693.9 |
| solute:na+ symporter, sss family | SAMN04487832_11478 | Not Available | + | 2880147 - 2881751 | 57319.8 |
| glycopeptide antibiotics resistance protein | SAMN04487832_11479 | Not Available | + | 2882194 - 2882733 | 20710.3 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487832_11480 | Not Available | - | 2882832 - 2883248 | 16029.7 |
| Trna-pro | Not Available | Not Available | + | 2883406 - 2883482 | Not Available |
| leucine rich repeat-containing protein | SAMN04487832_11482 | Not Available | - | 2883605 - 2884933 | 48656.5 |
| protein of unknown function | SAMN04487832_11483 | Not Available | - | 2885167 - 2885940 | 29270.9 |
| dna-directed rna polymerase specialized sigma subunit, sigma24 family | SAMN04487832_11484 | Not Available | - | 2885994 - 2886485 | 18992.0 |
| hypothetical protein | SAMN04487832_11485 | Not Available | - | 2886439 - 2886735 | 11616.9 |
| leucine rich repeat-containing protein | SAMN04487832_11486 | Not Available | + | 2887512 - 2889170 | 62074.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.