Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11467 | Not Available | + | 2859756 - 2860280 | 20322.3 |
| enolase | SAMN04487832_11468 | Not Available | - | 2860383 - 2861684 | 46403.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487832_11469 | Not Available | - | 2862106 - 2863284 | 44914.9 |
| hypothetical protein | SAMN04487832_11470 | Not Available | - | 2863350 - 2865176 | 68310.2 |
| uncharacterized membrane protein | SAMN04487832_11471 | Not Available | - | 2865192 - 2867291 | 79259.5 |
| cation-transporting atpase e | SAMN04487832_11472 | Not Available | - | 2867457 - 2869856 | 87498.0 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN04487832_11473 | Not Available | - | 2869853 - 2872105 | 85414.9 |
| cu2+-exporting atpase | SAMN04487832_11474 | Not Available | + | 2872283 - 2874802 | 88604.1 |
| biotin transport system substrate-specific component | SAMN04487832_11475 | Not Available | + | 2874961 - 2875524 | 20012.4 |
| glucuronoarabinoxylan endo-1,4-beta-xylanase | SAMN04487832_11476 | Not Available | + | 2875693 - 2877936 | 80775.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.