Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, pyridoxamine 5'-phosphate oxidase (pnpox-like) family | SAMN04487832_11447 | Not Available | - | 2841549 - 2842166 | 22789.3 |
| transcriptional regulator, badm/rrf2 family | SAMN04487832_11448 | Not Available | - | 2842220 - 2842657 | 15757.8 |
| hypothetical protein | SAMN04487832_11449 | Not Available | - | 2842675 - 2843304 | 22244.3 |
| hypothetical protein | SAMN04487832_11450 | Not Available | + | 2843660 - 2844322 | 26245.4 |
| uracil phosphoribosyltransferase | SAMN04487832_11451 | Not Available | - | 2844513 - 2845142 | 23060.3 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04487832_11452 | Not Available | - | 2845158 - 2845712 | 21042.6 |
| ribose 5-phosphate isomerase b | SAMN04487832_11453 | Not Available | - | 2845709 - 2846146 | 15574.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN04487832_11454 | Not Available | - | 2846219 - 2846911 | 24875.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN04487832_11455 | Not Available | - | 2846880 - 2847335 | 16667.6 |
| formate-tetrahydrofolate ligase | SAMN04487832_11456 | Not Available | - | 2847337 - 2849016 | 60261.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.