Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | SAMN04487832_1142 | Not Available | + | 2807631 - 2808152 | 19457.5 |
| hypothetical protein | SAMN04487832_1143 | Not Available | + | 2808740 - 2809045 | 11801.9 |
| hypothetical protein | SAMN04487832_1144 | Not Available | - | 2809190 - 2810548 | 51235.9 |
| hypothetical protein | SAMN04487832_11440 | Not Available | - | 2836093 - 2837292 | 44562.0 |
| hypothetical protein | SAMN04487832_11441 | Not Available | - | 2837634 - 2837864 | 8923.7 |
| hypothetical protein | SAMN04487832_11442 | Not Available | - | 2837885 - 2838451 | 21876.6 |
| protein of unknown function with hxxee motif-containing protein | SAMN04487832_11443 | Not Available | - | 2838596 - 2839105 | 19332.6 |
| smi1 / knr4 family (sukh-1) | SAMN04487832_11444 | Not Available | - | 2839162 - 2839632 | 18430.3 |
| nad-dependent protein deacetylase, sir2 family | SAMN04487832_11445 | Not Available | - | 2839963 - 2840814 | 33111.9 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04487832_11446 | Not Available | - | 2840780 - 2841544 | 28696.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.