Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11363 | Not Available | + | 2795912 - 2796049 | 5241.27 |
| hypothetical protein | SAMN04487832_11364 | Not Available | + | 2796175 - 2796297 | 4821.76 |
| rna polymerase sigma factor, sigma-70 family | SAMN04487832_11365 | Not Available | + | 2796304 - 2798415 | 77973.5 |
| hypothetical protein | SAMN04487832_11366 | Not Available | + | 2798419 - 2799315 | 32272.8 |
| mth538 tir-like domain | SAMN04487832_11367 | Not Available | + | 2799772 - 2803179 | 126653.0 |
| hypothetical protein | SAMN04487832_11368 | Not Available | + | 2803193 - 2805169 | 75396.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487832_11369 | Not Available | - | 2805960 - 2807039 | 40687.7 |
| l-2-amino-thiazoline-4-carboxylic acid hydrolase | SAMN04487832_11370 | Not Available | - | 2807090 - 2807332 | 9180.86 |
| hypothetical protein | SAMN04487832_11371 | Not Available | - | 2807345 - 2807481 | 5205.07 |
| protein of unknown function | SAMN04487832_1141 | Not Available | + | 2807482 - 2807616 | 4922.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.