Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11353 | Not Available | - | 2782895 - 2784100 | 44644.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_11354 | Not Available | - | 2784114 - 2784665 | 20854.1 |
| l-aspartate 1-decarboxylase | SAMN04487832_11355 | Not Available | - | 2785121 - 2785504 | 13995.8 |
| pantoate--beta-alanine ligase | SAMN04487832_11356 | Not Available | - | 2785515 - 2786363 | 31612.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMN04487832_11357 | Not Available | - | 2786365 - 2787204 | 29806.2 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04487832_11358 | Not Available | - | 2787307 - 2788146 | 30319.2 |
| parallel beta-helix repeat (two copies) | SAMN04487832_11359 | Not Available | - | 2788288 - 2789835 | 56128.7 |
| glycosyl hydrolases family 11 | SAMN04487832_11360 | Not Available | - | 2789897 - 2792980 | 114100.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_11361 | Not Available | + | 2793467 - 2794033 | 21405.1 |
| hypothetical protein | SAMN04487832_11362 | Not Available | + | 2794051 - 2795622 | 57495.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.