Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN04487832_11343 | Not Available | + | 2770140 - 2770841 | 25963.5 |
| putative abc transport system permease protein | SAMN04487832_11344 | Not Available | + | 2770841 - 2773552 | 99873.8 |
| glycosyl hydrolases family 11 | SAMN04487832_11345 | Not Available | + | 2773776 - 2776055 | 84277.5 |
| hypothetical protein | SAMN04487832_11346 | Not Available | - | 2776143 - 2778398 | 85109.2 |
| protein of unknown function | SAMN04487832_11347 | Not Available | - | 2778536 - 2778985 | 16996.3 |
| transcriptional regulator, lyttr family | SAMN04487832_11348 | Not Available | - | 2778985 - 2779434 | 17489.1 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04487832_11349 | Not Available | - | 2779460 - 2780236 | 28790.5 |
| hypothetical protein | SAMN04487832_11350 | Not Available | - | 2780306 - 2781025 | 26671.9 |
| hypothetical protein | SAMN04487832_11351 | Not Available | + | 2781247 - 2781747 | 19250.9 |
| protein of unknown function | SAMN04487832_11352 | Not Available | + | 2781960 - 2782808 | 31863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.