Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11323 | Not Available | + | 2752085 - 2753371 | 45668.5 |
| hypothetical protein | SAMN04487832_11324 | Not Available | + | 2753419 - 2753643 | 8481.16 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04487832_11325 | Not Available | - | 2753767 - 2754405 | 24462.8 |
| hypothetical protein | SAMN04487832_11326 | Not Available | - | 2754754 - 2755257 | 19070.9 |
| nitroreductase | SAMN04487832_11327 | Not Available | - | 2755423 - 2755935 | 18621.2 |
| hypothetical protein | SAMN04487832_11328 | Not Available | + | 2756193 - 2756363 | 6690.3 |
| right handed beta helix region | SAMN04487832_11329 | Not Available | + | 2756360 - 2758339 | 74207.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_11330 | Not Available | + | 2758586 - 2759059 | 18677.9 |
| hypothetical protein | SAMN04487832_11331 | Not Available | + | 2759056 - 2760147 | 40941.6 |
| hypothetical protein | SAMN04487832_11332 | Not Available | + | 2760203 - 2761099 | 33629.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.