Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endonuclease v | SAMN04487832_11313 | Not Available | + | 2734674 - 2735375 | 26270.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_11314 | Not Available | + | 2735546 - 2736037 | 19326.1 |
| putative zinc-finger | SAMN04487832_11315 | Not Available | + | 2736034 - 2737137 | 41383.2 |
| leucine rich repeat-containing protein | SAMN04487832_11316 | Not Available | - | 2737290 - 2739419 | 74571.0 |
| sortase family protein | SAMN04487832_11317 | Not Available | + | 2739760 - 2740578 | 30864.3 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04487832_11318 | Not Available | + | 2741052 - 2742422 | 51489.2 |
| two-component response regulator, sapr family, consists of rec, whth and btad domains | SAMN04487832_11319 | Not Available | + | 2742400 - 2743197 | 30305.3 |
| signal peptidase i | SAMN04487832_11320 | Not Available | + | 2743638 - 2744282 | 23902.7 |
| sortase, srtb family | SAMN04487832_11321 | Not Available | + | 2744303 - 2745589 | 49728.5 |
| listeria/bacterioides repeat-containing protein | SAMN04487832_11322 | Not Available | + | 2745608 - 2751949 | 239530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.