Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_101111 | Not Available | + | 140357 - 141223 | 32148.5 |
| cellulose binding domain-containing protein | SAMN04487832_101112 | Not Available | + | 141405 - 143876 | 90074.3 |
| carbohydrate binding domain-containing protein | SAMN04487832_101113 | Not Available | + | 144167 - 147361 | 115722.0 |
| large subunit ribosomal protein l1 | SAMN04487832_101114 | Not Available | - | 147534 - 148229 | 24593.8 |
| lsu ribosomal protein l11p | SAMN04487832_101115 | Not Available | - | 148345 - 148770 | 14843.3 |
| transcription antitermination protein nusg | SAMN04487832_101116 | Not Available | - | 148890 - 149417 | 19521.4 |
| preprotein translocase subunit sece | SAMN04487832_101117 | Not Available | - | 149439 - 149684 | 9138.38 |
| large subunit ribosomal protein l33 | SAMN04487832_101118 | Not Available | - | 149702 - 149851 | 5979.48 |
| sh3 domain-containing protein | SAMN04487832_101119 | Not Available | - | 150072 - 150620 | 19333.0 |
| pectate lyase | SAMN04487832_101120 | Not Available | + | 150920 - 154687 | 132290.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.