Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellum-specific peptidoglycan hydrolase flgj | SAMN04487832_11294 | Not Available | - | 2712541 - 2714613 | 79304.4 |
| hypothetical protein | SAMN04487832_11295 | Not Available | - | 2714642 - 2716507 | 70022.8 |
| hypothetical protein | SAMN04487832_11296 | Not Available | - | 2716504 - 2718312 | 66929.5 |
| phage integrase, n-terminal sam-like domain | SAMN04487832_11297 | Not Available | + | 2718607 - 2719149 | 20741.1 |
| phage integrase family protein | SAMN04487832_11298 | Not Available | + | 2719162 - 2719698 | 20629.3 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN04487832_11299 | Not Available | - | 2720006 - 2720974 | 37803.4 |
| ribbon-helix-helix protein, copg family | SAMN04487832_112100 | Not Available | - | 2721355 - 2721708 | 13834.7 |
| hypothetical protein | SAMN04487832_112101 | Not Available | - | 2722114 - 2722932 | 30786.7 |
| integrase core domain-containing protein | SAMN04487832_1131 | Not Available | + | 2722933 - 2723346 | 15734.5 |
| alpha/beta hydrolase fold | SAMN04487832_1132 | Not Available | + | 2723881 - 2724627 | 28131.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.