Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN04487832_11274 | Not Available | + | 2687891 - 2688898 | 38339.6 |
| dockerin type i repeat-containing protein | SAMN04487832_11275 | Not Available | + | 2690324 - 2693209 | 100533.0 |
| dockerin type i repeat-containing protein | SAMN04487832_11276 | Not Available | - | 2693456 - 2697103 | 135517.0 |
| hypothetical protein | SAMN04487832_11277 | Not Available | - | 2697689 - 2698009 | 12520.7 |
| type i restriction enzyme, r subunit | SAMN04487832_11278 | Not Available | - | 2698148 - 2701249 | 119971.0 |
| protein of unknown function | SAMN04487832_11279 | Not Available | - | 2701246 - 2702109 | 33547.8 |
| type i restriction enzyme, s subunit | SAMN04487832_11280 | Not Available | - | 2702110 - 2703315 | 46422.6 |
| hypothetical protein | SAMN04487832_11281 | Not Available | - | 2703341 - 2703556 | 8223.85 |
| type i restriction enzyme m protein | SAMN04487832_11282 | Not Available | - | 2703575 - 2705143 | 58633.8 |
| hypothetical protein | SAMN04487832_11283 | Not Available | + | 2705472 - 2705666 | 7245.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.