Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487832_11264 | Not Available | + | 2677090 - 2679300 | 82998.5 |
| uncharacterized protein yxji | SAMN04487832_11265 | Not Available | + | 2679313 - 2679801 | 17990.3 |
| 6-phosphofructokinase 1 | SAMN04487832_11266 | Not Available | + | 2679828 - 2680910 | 38557.6 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN04487832_11267 | Not Available | - | 2680973 - 2682319 | 50134.3 |
| hypothetical protein | SAMN04487832_11268 | Not Available | - | 2682316 - 2683698 | 51934.6 |
| iron (metal) dependent repressor, dtxr family | SAMN04487832_11269 | Not Available | - | 2683716 - 2684096 | 14124.9 |
| acyl-coa thioester hydrolase | SAMN04487832_11270 | Not Available | - | 2684259 - 2684687 | 16643.0 |
| cardiolipin synthase | SAMN04487832_11271 | Not Available | + | 2684874 - 2686406 | 58488.0 |
| hypothetical protein | SAMN04487832_11272 | Not Available | + | 2686425 - 2686895 | 18152.4 |
| Trna-trp | Not Available | Not Available | + | 2687003 - 2687078 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.