Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04487832_11254 | Not Available | + | 2667578 - 2668204 | 24090.8 |
| energy-coupling factor transport system substrate-specific component | SAMN04487832_11255 | Not Available | + | 2668279 - 2668890 | 22219.4 |
| energy-coupling factor transport system permease protein | SAMN04487832_11256 | Not Available | + | 2668892 - 2669641 | 27708.6 |
| energy-coupling factor transport system atp-binding protein | SAMN04487832_11257 | Not Available | + | 2669638 - 2671569 | 70446.1 |
| abc transporter | SAMN04487832_11258 | Not Available | + | 2671566 - 2672750 | 43438.2 |
| hypothetical protein | SAMN04487832_11259 | Not Available | + | 2672743 - 2672925 | 6518.43 |
| leucine carboxyl methyltransferase | SAMN04487832_11260 | Not Available | + | 2672951 - 2673712 | 28195.9 |
| hypothetical protein | SAMN04487832_11261 | Not Available | + | 2673837 - 2674337 | 19152.8 |
| signal transduction histidine kinase | SAMN04487832_11262 | Not Available | - | 2674678 - 2676150 | 56206.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487832_11263 | Not Available | - | 2676140 - 2676814 | 25946.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.