Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11244 | Not Available | - | 2657701 - 2658807 | 40216.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_11245 | Not Available | - | 2658794 - 2659348 | 21610.8 |
| hypothetical protein | SAMN04487832_11246 | Not Available | - | 2659796 - 2660521 | 25837.3 |
| glucan-binding domain-containing protein (yg repeat) | SAMN04487832_11247 | Not Available | - | 2660535 - 2662532 | 74328.8 |
| Trna-gln | Not Available | Not Available | + | 2662728 - 2662802 | Not Available |
| orotate phosphoribosyltransferase | SAMN04487832_11249 | Not Available | - | 2662944 - 2663594 | 23750.8 |
| uncharacterised protein family upf0547 | SAMN04487832_11250 | Not Available | - | 2663689 - 2664033 | 12799.4 |
| rna polymerase, sigma 27/28 subunit, rpsk/sigk | SAMN04487832_11251 | Not Available | - | 2664150 - 2664830 | 25756.0 |
| dna ligase (nad+) | SAMN04487832_11252 | Not Available | + | 2664969 - 2666951 | 73146.4 |
| arsenate reductase | SAMN04487832_11253 | Not Available | + | 2666968 - 2667315 | 13433.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.