Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMN04487832_11234 | Not Available | + | 2647862 - 2648983 | 41814.7 |
| riboflavin synthase alpha chain | SAMN04487832_11235 | Not Available | + | 2648983 - 2649630 | 23068.7 |
| hypothetical protein | SAMN04487832_11236 | Not Available | + | 2649659 - 2650492 | 29470.6 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN04487832_11237 | Not Available | + | 2650492 - 2651700 | 45069.3 |
| hypothetical protein | SAMN04487832_11238 | Not Available | + | 2651730 - 2652224 | 19027.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN04487832_11239 | Not Available | + | 2652245 - 2652712 | 16583.1 |
| phosphoglycolate phosphatase | SAMN04487832_11240 | Not Available | + | 2652712 - 2653371 | 25525.2 |
| hypothetical protein | SAMN04487832_11241 | Not Available | + | 2653390 - 2655015 | 62704.1 |
| ctp:phosphocholine cytidylyltransferase | SAMN04487832_11242 | Not Available | + | 2655285 - 2657078 | 68998.3 |
| hypothetical protein | SAMN04487832_11243 | Not Available | + | 2657059 - 2657535 | 18299.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.