Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11223 | Not Available | - | 2636046 - 2636780 | 27546.2 |
| hypothetical protein | SAMN04487832_11224 | Not Available | - | 2636931 - 2637968 | 39190.8 |
| hypothetical protein | SAMN04487832_11225 | Not Available | + | 2638456 - 2638944 | 18501.3 |
| ferrous iron transport protein b | SAMN04487832_11226 | Not Available | - | 2639058 - 2640899 | 67343.2 |
| ferrous iron transport protein a | SAMN04487832_11227 | Not Available | - | 2640896 - 2641117 | 8149.81 |
| Trna-leu | Not Available | Not Available | + | 2641768 - 2641854 | Not Available |
| hypothetical protein | SAMN04487832_11229 | Not Available | + | 2642042 - 2642797 | 27172.5 |
| peptidoglycan-binding (pgrp) domain of peptidoglycan hydrolases-containing protein | SAMN04487832_11230 | Not Available | + | 2642800 - 2644194 | 51881.1 |
| putative peptidoglycan binding domain-containing protein | SAMN04487832_11231 | Not Available | + | 2644209 - 2644730 | 19636.4 |
| beta-glucosidase | SAMN04487832_11232 | Not Available | + | 2644865 - 2647624 | 103911.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.