Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine reductase | SAMN04487832_1123 | Not Available | - | 2614639 - 2615136 | 19113.7 |
| 7-cyano-7-deazaguanine synthase | SAMN04487832_1124 | Not Available | - | 2615140 - 2615826 | 23992.2 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04487832_1125 | Not Available | - | 2615967 - 2617892 | 74723.1 |
| signal transduction histidine kinase | SAMN04487832_1126 | Not Available | - | 2618063 - 2618950 | 33310.1 |
| hypothetical protein | SAMN04487832_1127 | Not Available | - | 2618966 - 2619835 | 32962.1 |
| abc-2 type transport system atp-binding protein | SAMN04487832_1128 | Not Available | - | 2619832 - 2620749 | 34909.2 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04487832_1129 | Not Available | + | 2621042 - 2621461 | 15504.3 |
| 7-carboxy-7-deazaguanine synthase | SAMN04487832_11210 | Not Available | + | 2621465 - 2622148 | 25905.4 |
| gtp cyclohydrolase i | SAMN04487832_11211 | Not Available | + | 2622151 - 2622711 | 20805.9 |
| serpin b | SAMN04487832_11212 | Not Available | + | 2622840 - 2624384 | 57519.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.