Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease clpp, protease subunit | SAMN04487832_101101 | Not Available | + | 128725 - 129435 | 25754.7 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04487832_101102 | Not Available | + | 129522 - 132182 | 96193.4 |
| uncharacterized radical sam protein ygiq | SAMN04487832_101103 | Not Available | + | 132201 - 134159 | 73893.5 |
| metal-dependent hydrolase, beta-lactamase superfamily ii | SAMN04487832_101104 | Not Available | + | 134192 - 135034 | 31012.7 |
| protein of unknown function | SAMN04487832_101105 | Not Available | + | 135031 - 135246 | 8232.8 |
| hypothetical protein | SAMN04487832_101106 | Not Available | + | 135239 - 136456 | 44143.3 |
| putative abc-transporter type iv | SAMN04487832_101107 | Not Available | + | 136466 - 136990 | 19852.6 |
| cytidylate kinase | SAMN04487832_101108 | Not Available | + | 137027 - 137701 | 24683.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04487832_101109 | Not Available | + | 137685 - 138317 | 23210.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04487832_101110 | Not Available | + | 138310 - 140283 | 72339.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.