Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 2606724 - 2606800 | Not Available |
| Trna-his | Not Available | Not Available | + | 2606859 - 2606932 | Not Available |
| hypothetical protein | SAMN04487832_111113 | Not Available | - | 2607572 - 2608468 | 33435.5 |
| hypothetical protein | SAMN04487832_111114 | Not Available | - | 2608555 - 2608848 | 11586.0 |
| hypothetical protein | SAMN04487832_111115 | Not Available | - | 2608976 - 2609440 | 18329.6 |
| hypothetical protein | SAMN04487832_111116 | Not Available | - | 2609456 - 2610163 | 27352.4 |
| helix-turn-helix | SAMN04487832_111117 | Not Available | + | 2610436 - 2610804 | 14185.9 |
| leucine rich repeat-containing protein | SAMN04487832_111118 | Not Available | + | 2611154 - 2612094 | 33515.8 |
| hypothetical protein | SAMN04487832_1121 | Not Available | - | 2612095 - 2612346 | 9917.13 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487832_1122 | Not Available | - | 2612466 - 2614382 | 72967.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.