Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding domain-containing protein, expansin | SAMN04487832_11171 | Not Available | - | 2563565 - 2564449 | 32359.4 |
| hypothetical protein | SAMN04487832_11172 | Not Available | - | 2564465 - 2564932 | 17630.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN04487832_11173 | Not Available | - | 2564934 - 2565971 | 36669.4 |
| amidophosphoribosyltransferase | SAMN04487832_11174 | Not Available | - | 2566095 - 2567522 | 53142.8 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN04487832_11175 | Not Available | - | 2567527 - 2568246 | 27316.8 |
| hypothetical protein | SAMN04487832_11176 | Not Available | - | 2568320 - 2568526 | 7169.71 |
| phosphoglycolate phosphatase | SAMN04487832_11177 | Not Available | - | 2568548 - 2569198 | 24184.0 |
| protein of unknown function | SAMN04487832_11178 | Not Available | - | 2569198 - 2569854 | 24787.5 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN04487832_11179 | Not Available | - | 2569894 - 2570394 | 17019.1 |
| hypothetical protein | SAMN04487832_11180 | Not Available | - | 2570412 - 2571569 | 42378.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.