Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04487832_11120 | Not Available | + | 2507615 - 2510470 | 105994.0 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04487832_11121 | Not Available | + | 2510744 - 2511841 | 41109.4 |
| phosphoglucosamine mutase | SAMN04487832_11122 | Not Available | + | 2511998 - 2513383 | 50698.3 |
| hypothetical protein | SAMN04487832_11123 | Not Available | + | 2513609 - 2515207 | 60155.3 |
| hypothetical protein | SAMN04487832_11124 | Not Available | - | 2515487 - 2517037 | 58167.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_11125 | Not Available | - | 2517049 - 2517606 | 20677.6 |
| hypothetical protein | SAMN04487832_11126 | Not Available | + | 2517955 - 2518359 | 15871.9 |
| 4-hydroxy 2-oxovalerate aldolase | SAMN04487832_11127 | Not Available | - | 2518557 - 2519531 | 36562.6 |
| hypothetical protein | SAMN04487832_11128 | Not Available | - | 2519657 - 2520976 | 49786.2 |
| hypothetical protein | SAMN04487832_11129 | Not Available | - | 2521267 - 2522103 | 30373.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.