Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_11110 | Not Available | + | 2497893 - 2498213 | 12133.7 |
| transposase | SAMN04487832_11111 | Not Available | + | 2498207 - 2498563 | 13677.7 |
| transposase | SAMN04487832_11112 | Not Available | + | 2498656 - 2500185 | 58089.3 |
| leucine rich repeat-containing protein | SAMN04487832_11113 | Not Available | - | 2500307 - 2502118 | 66660.9 |
| hypothetical protein | SAMN04487832_11114 | Not Available | + | 2502775 - 2502906 | 5184.02 |
| sporulation initiation factor spo0a c terminal | SAMN04487832_11115 | Not Available | + | 2503100 - 2503510 | 16011.2 |
| two component transcriptional regulator, lyttr family | SAMN04487832_11116 | Not Available | + | 2503538 - 2504287 | 29041.8 |
| hpt domain-containing protein | SAMN04487832_11117 | Not Available | + | 2504292 - 2504657 | 13889.5 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN04487832_11118 | Not Available | + | 2504685 - 2505020 | 12754.3 |
| pas domain s-box-containing protein | SAMN04487832_11119 | Not Available | + | 2505103 - 2507628 | 95926.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.