Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_110137 | Not Available | - | 2485224 - 2485466 | 7762.4 |
| dockerin type i repeat-containing protein | SAMN04487832_1111 | Not Available | + | 2485665 - 2486084 | 15233.2 |
| site-specific dna recombinase | SAMN04487832_1112 | Not Available | - | 2486145 - 2486822 | 25603.0 |
| hypothetical protein | SAMN04487832_1113 | Not Available | - | 2487003 - 2487419 | 14977.1 |
| nuclease-related domain-containing protein | SAMN04487832_1114 | Not Available | - | 2487570 - 2488736 | 44828.5 |
| helix-turn-helix | SAMN04487832_1115 | Not Available | - | 2488866 - 2489714 | 31963.3 |
| type i restriction enzyme m protein | SAMN04487832_1116 | Not Available | + | 2490219 - 2492045 | 68735.7 |
| type i restriction enzyme, s subunit | SAMN04487832_1117 | Not Available | + | 2492042 - 2493223 | 44906.0 |
| hypothetical protein | SAMN04487832_1118 | Not Available | + | 2493220 - 2494263 | 40675.7 |
| type i restriction enzyme, r subunit | SAMN04487832_1119 | Not Available | + | 2494276 - 2497407 | 120872.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.