Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannan endo-1,4-beta-mannosidase | SAMN04487832_110117 | Not Available | + | 2463289 - 2465118 | 68147.1 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04487832_110118 | Not Available | + | 2465170 - 2465679 | 19164.6 |
| preprotein translocase subunit yajc | SAMN04487832_110119 | Not Available | - | 2465743 - 2466261 | 18765.6 |
| protein of unknown function | SAMN04487832_110120 | Not Available | - | 2466389 - 2467375 | 36151.1 |
| large subunit ribosomal protein l7/l12 | SAMN04487832_110121 | Not Available | - | 2467573 - 2467947 | 12677.2 |
| lsu ribosomal protein l10p | SAMN04487832_110122 | Not Available | - | 2468041 - 2468553 | 18210.9 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04487832_110123 | Not Available | - | 2468794 - 2469213 | 15817.0 |
| von willebrand factor type a domain-containing protein | SAMN04487832_110124 | Not Available | + | 2469620 - 2470306 | 24788.2 |
| hypothetical protein | SAMN04487832_110125 | Not Available | + | 2470374 - 2472419 | 76005.1 |
| protein kinase domain-containing protein | SAMN04487832_110126 | Not Available | + | 2472419 - 2474098 | 61474.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.