Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_110107 | Not Available | - | 2452029 - 2453336 | 49804.3 |
| hypothetical protein | SAMN04487832_110108 | Not Available | - | 2453422 - 2454213 | 28965.4 |
| abc-2 type transport system atp-binding protein | SAMN04487832_110109 | Not Available | - | 2454207 - 2454905 | 25953.7 |
| hypothetical protein | SAMN04487832_110110 | Not Available | - | 2454910 - 2455836 | 34034.8 |
| hypothetical protein | SAMN04487832_110111 | Not Available | - | 2455851 - 2456888 | 38302.7 |
| dna-binding transcriptional regulator yhcf, gntr family | SAMN04487832_110112 | Not Available | - | 2456912 - 2457265 | 13565.3 |
| spore protease | SAMN04487832_110113 | Not Available | - | 2457438 - 2458286 | 30410.7 |
| small subunit ribosomal protein s20 | SAMN04487832_110114 | Not Available | + | 2458514 - 2458774 | 9162.43 |
| aspartate kinase | SAMN04487832_110115 | Not Available | + | 2459016 - 2460353 | 49229.0 |
| alpha-l-fucosidase 2 | SAMN04487832_110116 | Not Available | + | 2460953 - 2463271 | 85772.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.