Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative sporulation protein ytaf | SAMN04487832_11097 | Not Available | - | 2441188 - 2441814 | 21822.2 |
| carbamoyl-phosphate synthase large subunit | SAMN04487832_11098 | Not Available | - | 2441934 - 2445152 | 118343.0 |
| hypothetical protein | SAMN04487832_11099 | Not Available | + | 2445620 - 2445976 | 12613.3 |
| succinyl-diaminopimelate desuccinylase | SAMN04487832_110100 | Not Available | - | 2446264 - 2447565 | 46605.2 |
| multiple sugar transport system atp-binding protein | SAMN04487832_110101 | Not Available | - | 2447679 - 2448818 | 42395.6 |
| 16s rrna pseudouridine516 synthase | SAMN04487832_110102 | Not Available | - | 2448944 - 2449723 | 29209.6 |
| protein of unknown function | SAMN04487832_110103 | Not Available | + | 2449811 - 2450236 | 15731.8 |
| uncharacterized membrane protein | SAMN04487832_110104 | Not Available | - | 2450239 - 2450613 | 14008.5 |
| transcriptional repressor nrdr | SAMN04487832_110105 | Not Available | - | 2450606 - 2451097 | 18905.7 |
| sugar phosphate isomerase/epimerase | SAMN04487832_110106 | Not Available | - | 2451094 - 2451891 | 29972.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.